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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
10/05/2019 |
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Actualizado : |
10/05/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
GONZÁLEZ-ARCOS, M.; DE NORONHA FONSECA, M.E.; ZANDONADI, D.B.; PERES, L.E.P.; ARRUABARRENA, A.; FERREIRA, D.S.; KEVEI, Z.; MOHAREB, F.; THOMPSON, A.J.; BOITEUX, L.S. |
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Afiliación : |
MATIAS GONZÁLEZ-ARCOS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARIA ESTHER DE NORONHA FONSECA, Nacional Center for Vegetable Crops Research (CNPH) – Embrapa Vegetable Crops (Hortaliças), Brazil; DANIEL BASÍLIO ZANDONADI, Universidade Federal do Rio de Janeiro (UFRJ), Nupem, Macaé, Brazil; LÁZARO E. P. PERES, Laboratory of Hormonal Control of Plant Development, Departamento de Ciências Biológicas, Escola Superior de Agricultura Luiz de Queiroz, Universidade de São Paulo (ESALQ/USP), Piracicaba, Brazil; ANA ARRUABARRENA PASCOVICH, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; DEMETRYUS S. FERREIRA, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; ZOLTAN KEVEI, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; FADY MOHAREB, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; ANDREW J. THOMPSON, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; LEONARDO S. BOITEUX, Nacional Center for Vegetable Crops Research (CNPH) – Embrapa Vegetable Crops (Hortaliças), Brasília, Brazil. |
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Título : |
A loss-of-function allele of a TAC1-like gene (SlTAC1) located on tomato chromosome 10 is a candidate for the Erectoid leaf (Erl) mutation. |
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Fecha de publicación : |
2019 |
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Fuente / Imprenta : |
Euphytica, 1 May 2019, Volume 215, Issue 5, Article number 95. |
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ISSN : |
0014-2336 |
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DOI : |
10.1007/s10681-019-2418-1 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 21 December 2018 / Accepted: 10 April 2019 / First Online: 16 April 2019.
This work was done in the context of MG-A doctoral studies program at the Facultad de Agronomía, Universidad de la República Oriental del Uruguay. We thank A. Manzzioni, I. Laxague and N. Zunini of INIA Salto Grande, and W. P. Dutra and A. F. Costa of Embrapa Vegetable Crops, for their assistance in conducting some of the experiments. LSB and MENF were supported by CNPq and CAPES grants. AJT and FM were supported by BBSRC Research Grant BB/ L011611/1. |
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Contenido : |
ABSTRACT.
The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-isogenic lines were also homozygous for each of the alternate alleles, reinforcing Solyc10g009320 as a strong Erl candidate gene and opening the possibility for fine-tuning manipulation of tomato architecture in breeding programs.
© 2019, Springer Nature B.V. MenosABSTRACT.
The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-... Presentar Todo |
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Palabras claves : |
Breeding; Comparative genomic analysis; Plant architecture; Resequencing; Solanum lycopersicum. |
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Thesagro : |
TOMATE. |
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Asunto categoría : |
F01 Cultivo |
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Marc : |
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022 $a0014-2336
024 7 $a10.1007/s10681-019-2418-1$2DOI
100 1 $aGONZÁLEZ-ARCOS, M.
245 $aA loss-of-function allele of a TAC1-like gene (SlTAC1) located on tomato chromosome 10 is a candidate for the Erectoid leaf (Erl) mutation.$h[electronic resource]
260 $c2019
500 $aArticle history: Received: 21 December 2018 / Accepted: 10 April 2019 / First Online: 16 April 2019. This work was done in the context of MG-A doctoral studies program at the Facultad de Agronomía, Universidad de la República Oriental del Uruguay. We thank A. Manzzioni, I. Laxague and N. Zunini of INIA Salto Grande, and W. P. Dutra and A. F. Costa of Embrapa Vegetable Crops, for their assistance in conducting some of the experiments. LSB and MENF were supported by CNPq and CAPES grants. AJT and FM were supported by BBSRC Research Grant BB/ L011611/1.
520 $aABSTRACT. The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-isogenic lines were also homozygous for each of the alternate alleles, reinforcing Solyc10g009320 as a strong Erl candidate gene and opening the possibility for fine-tuning manipulation of tomato architecture in breeding programs. © 2019, Springer Nature B.V.
650 $aTOMATE
653 $aBreeding
653 $aComparative genomic analysis
653 $aPlant architecture
653 $aResequencing
653 $aSolanum lycopersicum
700 1 $aDE NORONHA FONSECA, M.E.
700 1 $aZANDONADI, D.B.
700 1 $aPERES, L.E.P.
700 1 $aARRUABARRENA, A.
700 1 $aFERREIRA, D.S.
700 1 $aKEVEI, Z.
700 1 $aMOHAREB, F.
700 1 $aTHOMPSON, A.J.
700 1 $aBOITEUX, L.S.
773 $tEuphytica, 1 May 2019, Volume 215, Issue 5, Article number 95.
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| 41. |  | AGUERRE, M.; CAJARVILLE, C.; LA MANNA, A.; CAVESTANY, D.; MENDOZA, A.; MATTIAUDA, D.; CARRIQUIRY, M.; REPETTO, J.L.; MEIKLE, A.; CHILIBROSTE, P. Estrategias de alimentación de vacas lecheras en pastoreo: ¿qué hemos aprendido de los sistemas comerciales y qué hemos generado desde la investigación en Uruguay?. Montevideo (UY): Red Tecnológica Sectorial, 2017. Instituciones co-participantes: ANII (Agencia Nacional de Investigación e Innovación), UdelaR (Universidad de la República), CONAPROLE (Cooperativa Nacional de Productores de Leche), INIA (Institituto Nacional de Investigación...| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas. |
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| 42. | | GARCÍA-ROCHE, M.; TALMÓN, D.; CAÑIBE, G.; MENDOZA, A.; QUIJANO, C.; CASSINA, A.; CARRIQUIRY, M. Expresión génica hepática de la vía del receptor alfa activado por proliferador de peroxisomas A (PPARA) en dos genotipos Holstein. [abstract]. In: AUPA, Proceedings del VII Congreso Uruguayo de Producción Animal. Sección Cambio Climático y Producción Sostenible (Climate Change Section), 14 y 15 diciembre 2021. Archivos Latinoamericanos de Producción Animal, 29(Supl.1), p.2. (Archivos Latinoamericanos de Producción Animal, Vol.29, Supl.1)| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA Las Brujas. |
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| 43. | | GARCIA ROCHE, M.; TALMÓN, D.; JORGE-SMEDING, E.; CASAL, A.; MENDOZA, A.; QUIJANO, C.; CARRIQUIRY, M; CASSINA, A. Función mitocondrial en biopsias de hígado de vacas lecheras de dos genotipos Holstein en condiciones pastoriles. [Resumen]. En: CONGRESO ASOCIACIÓN URUGUAYA DE PRODUCCIÓN ANIMAL (6º, Marzo, 2018, Tacuarembó, Uruguay). Tacuarembó: AUPA, 2018. p. 34.| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA La Estanzuela. |
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| 45. | | MARÍN, M.F.; NAYA, H.; DEVINCENZI, T.; NAVAJAS, E.; ESPASANDIN, A. C.; CARRIQUIRY, M. Heart rate of grazing Hereford heifers classified by paternal RFI. [Poster] EAAP - 72nd Annual Meeting, Davos, Switzerland. Session 23, Poster 11. In: Annual Meeting of the European Federation of Animal Science (EAAP), 72., 30 August - 3 September 2021, Davos, Switzerland. Book of abstracts. Wageningen, NL: WAP, 2021. p.278. doi: https://doi.org/10.3920/978-90-8686-918-3 Conference website: www.eaap2021.org| Biblioteca(s): INIA Las Brujas. |
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| 46. | | GARCÍA-ROCHE, M.; TALMÓN, D.; CAÑIBE, G.; ASTESSIANO, A.L.; MENDOZA, A.; CASSINA, A.; QUIJANO, C.; CARRIQUIRY, M. Hepatic metabolism of grazing cows of two Holstein strains under two feeding strategies with different levels of pasture inclusion. PLoS ONE, October 2023, Volume 18, Issue 10, e0290551. https://doi.org/10.1371/journal.pone.0290551 -- OPEN ACCESS. Article history: Received March 22 2023; Accepted August 9 2023; Published October 26 2023. -- Correspondence: García-Roche, M.; Facultad de Agronomía, Departamento de Producción Animal y Pasturas, Universidad de la República, Montevideo,...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
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| 48. | | TALMÓN, D.; MENDOZA, A.; CARRIQUIRY, M. Holstein strain affects energy and feed efficiency in a grazing dairy system. Animal Production Science, 2022, Volume 62, Issue 8, pages 765-773. doi: https://doi.org/10.1071/AN20587 Article history: Submitted 18 October 2020; Accepted 23 November 2021; Published online 20 January 2022.
Handling Editor: Pablo Gregorini.
Corresponding author: Talmón, D.; Departamento de Producción Animal y Pasturas, Facultad de...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas. |
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| 49. | | QUINTANS, G.; SCARSI, A.; ROIG, G.; CARRIQUIRY, M.; BANCHERO, G. Influence of a short-term prepartum supplementation of beef cows and calves performance in pastoral conditions. Animal Production Science, v. 56, no. 11, p. 1913-1919, 2016. Article history: Received 11 February 2015, accepted 11 June 2015, published online 15 September 2015.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
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| 50. | | FERRARO, B.; LANFRANCO, B.; KANTER, D.; BERVEJILLO, J.; CARRIQUIRY, M.; SALDIAS, R.; SILVA, M.E.; MONDELLI, M. Intensificación sostenible de la ganadería: Uruguay 2030. IN: UFFIP (PROYECTO MEJORA EN LA SOSTENIBILIDAD DE LA GANADERÍA FAMILIAR DE URUGUAY); AGRESEARCH (NUEVA ZELANDA); INSTITUTO PLAN AGROPECUARIO (IPA); INSTITUTO NACIONAL DE INVESTIGACIÓN AGROPECUARIA (INIA); MINISTERIO DE GANADERÍA, AGRICULTURA Y PESCA (MGAP). Taller Sobre Intensificación Sostenible en Ganadería Familiar. Montevideo (UY): INIA, 2015. p. 29-38| Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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| 51. | | LANFRANCO, B.; SOARES DE LIMA, J.M.; FERRARO, B.; SALDIAS, R.; BERVEJILLO, J.; SILVA, MA.E.; CARRIQUIRY, M.; KANTER, D.; PENENGO, C. Intensificación sostenible de la ganadería vacuna. Revista INIA Uruguay, 2016, No.45, p. 44-48. (Revista INIA; 45)| Tipo: Artículos en Revistas Agropecuarias |
| Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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| 52. | | GUGGERI, D.; MEIKLE, A.; CARRIQUIRY, M.; DE BARBIERI, I.; MONTOSSI, F.; VIÑOLES, C. Long-term effect of early nutrition on endocrine parameters and liver and endometrial gene expression of the members of the somatotrophic axis in Hereford heifers. Reproduction in Domestic Animals, 2018, v. 53 (4):930-936. DOI: 10.1111/rda.13190 Article history: Received: 12 January 2018; Accepted: 11 February 2018. ACKNOWLEDGEMENTS: The authors would like to thank all the staff at Glencoe Research
Station, and the Laboratory of Animal Endocrinology and Metabolism, for their...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Tacuarembó. |
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| 53. | | ASTESSIANO, A.L.; PÉREZ-CLARIGET, R.; QUINTANS, G.; SOCA, A.; MEIKLE, A.; CROOKER, B.A.; CARRIQUIRY, M. Metabolic and endocrine profiles and hepatic gene expression in periparturient, grazing primiparous cows with different body reserves. Livestock Science, 2014, v.170, no. 1, p. 63-71 Article history: received 12 April 2014; received in revised form 3 October 2014; accepted 6 October 2014.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 2 |
| Biblioteca(s): INIA Treinta y Tres. |
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| 55. | | RUGGIA, A.; CARRACELAS, B.; CIAPPESONI, G.; DEL PINO, M.L.; DEVINCENZI, T.; MONTALDO, S.; CARRIQUIRY, M.; NAVAJAS, E. Núcleo Informativo Hereford de INIA Las Brujas. Anuario Hereford (Montevideo), 2020, p. 214-215.| Biblioteca(s): INIA La Estanzuela; INIA Tacuarembó. |
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| 56. | | DEVINCENZI, T.; MARÍN, M.F.; CUADRO, P.; RUGGIA, A.; DEL PINO, M.L.; FRUGONI, J.C.; LEMA, O.M.; CALISTRO, A.; LUZARDO, S.; BRITO, G.; CARRIQUIRY, M.; ARMSTRONG, E.; PEÑAGARICANO, F.; JARA, E. Núcleo Informativo Hereford de la Unidad Glencoe? INIA Tacuarembó. Anuario Hereford (Montevideo), 2020, p. 214-215.| Biblioteca(s): INIA La Estanzuela; INIA Tacuarembó. |
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| 59. | | GARCIA-ROCHE, M.; CAÑIBE, G.; ASTESSIANO, A.; TALMON, D.; MENDOZA, A.; CASSINA, A.; QUIJANO, C.; CARRIQUIRY, M. O14 Hepatic energy reserves and carnitine palmitoyltransferase activity in grazing dairy cows of two pasture-based systems during lactation. [conference abstract] Animal - science proceedings, August 2022, Volume 13, Issue 3, pages 260-261. https://doi.org/10.1016/j.anscip.2022.07.024 Article histrory: Available online 16 September 2022, Version of Record 16 September 2022. -- Funding: MGR was supported by CAP fellowship BDDX_2018_1#49004502. The project was funded by CSIC I+D 2018 ID 103 awarded to MC and CQ and by...| Tipo: Abstracts/Resúmenes |
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